Complete genome sequence of thermophilic Bacillus smithii type strain DSM 4216T

نویسندگان

  • Elleke F Bosma
  • Jasper J Koehorst
  • Sacha A F T van Hijum
  • Bernadet Renckens
  • Bastienne Vriesendorp
  • Antonius H P van de Weijer
  • Peter J Schaap
  • Willem M de Vos
  • John van der Oost
  • Richard van Kranenburg
چکیده

Bacillus smithii is a facultatively anaerobic, thermophilic bacterium able to use a variety of sugars that can be derived from lignocellulosic feedstocks. Being genetically accessible, it is a potential new host for biotechnological production of green chemicals from renewable resources. We determined the complete genomic sequence of the B. smithii type strain DSM 4216(T), which consists of a 3,368,778 bp chromosome (GenBank accession number CP012024.1) and a 12,514 bp plasmid (GenBank accession number CP012025.1), together encoding 3880 genes. Genome annotation via RAST was complemented by a protein domain analysis. Some unique features of B. smithii central metabolism in comparison to related organisms included the lack of a standard acetate production pathway with no apparent pyruvate formate lyase, phosphotransacetylase, and acetate kinase genes, while acetate was the second fermentation product.

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عنوان ژورنال:

دوره 11  شماره 

صفحات  -

تاریخ انتشار 2016